Prolonged or chronic critical illness – a term applied to patients that survive severe injury or infection, but fail to start recovering after a few days – is characterized by low levels of peripheral hormones (including T3, IGF-1, cortisol and testosterone). This pattern is increasingly recognized as a neuroendocrine dysfunction inhibiting patients’ recovery, requiring treatment independent of the initial illness or trauma.

The same pattern of altered hormone levels has been documented in ME/CFS and fibromyalgia, suggesting that the research into the mechanisms and treatments from the field of critical illness may be relevant for ME/CFS and fibromyalgia.

Pro-inflammatory cytokines play a role in inducing and maintaining the uniform suppression of the neuroendocrine axes — predominantly at the level of the hypothalamus — during prolonged critical illness irrespective of the initial injury or infection.

In order to remedy this neuroendocrine dysfunction in prolonged critical illness, treatments targeting different points along the various neuroendocrine axes have been trialed with some surprising successes. Some of the same treatments have also independently been trialed for ME/CFS and fibromyalgia.

Trials in prolonged critical illness, ME/CFS and fibromyalgia have shown benefits from direct supplementation with peripheral hormones (e.g. with T3, GH, IGF-1, cortisol and testosterone). Moreover, promising results from critical illness research suggests that treatments targeting the functioning of the central endocrine glands (i.e. the hypothalamus and pituitary) may be safer and even more effective for restoring normal metabolism than supplementation with peripheral hormones.

Table of Contents




Section 1: Neuroendocrine dysfunctions in critical illness and ME/CFS                                                         

Thyrotropic axis: “HPT Axis”                                                                                                                                    

Somatotropic (growth hormone) axis: “HPS Axis”                                                                                          

Adreno-cortical axis: “HPA Axis”                                                                                                                          

Gonadotropic axis: “HPG Axis”                                                                                                                             

Interactions across the neuroendocrine axes and interactions with the immune system   

Section II: Treatment

Note: This is my second blog post on the relevance of research on critical illness for ME/CFS. I recommend you read my previous blog post first, but this post can also be read on its own.

The Relevance of Research on Critical Illnesses for Chronic Fatigue Syndrome ME/CFS: A vicious cycle between cytokines, oxidative stress and thyroid hormones


The neuroendocrine axes regulate every physiological process in the body, including metabolism, reproduction, growth, development, fluid balance, and the stress response.

Decades of research in the field of critical illness medicine have demonstrated that the neuroendocrine axes experience essentially the same profound alterations during all types of severe injury or infection – termed “critical illnesses.” However, the alterations differ significantly between the acute phase of critical illness (the first hours or days of onset) and the prolonged or chronic phase (when recovery does not occur within a few days) (van den Berghe, 2016).

Mechanisms involving pro-inflammatory cytokines and oxidative/nitrosative stress (O&NS) underpin these alterations (van den Berghe, 2000) and the subsequent mitochondrial damage that occurs (Preiser et al., 2014).

In parallel, decades of research have shown a suppression of neuroendocrine axes in ME/CFS and fibromyalgia (Riedel et al., 1998; Gupta and Silman, 2004), which, in fact, resembles that observed during prolonged critical illness. Moreover, patterns of pro-inflammatory cytokines and O&NS have also been documented in ME/CFS and fibromyalgia (Jason et al., 2009; Morris et al., 2016), and these have been shown to impact mitochondrial function and ATP production (Morris et al. 2019).

The objective of this blog post is to provide a summary of the neuroendocrine dysfunctions that typically occur during prolonged critical illness, and to highlight the similarities to dysfunctions documented in ME/CFS and fibromyalgia. I argue that the research from the field of critical illness may provide important insights into understanding the mechanisms of ME/CFS – and vice versa.

In this blog post I will:

  • describe the alterations in the thyrotropic, somatotropic, adreno-cortical, and gonadotropic neuroendocrine axes during prolonged critical illness, as well as the similarities to findings in ME/CFS and fibromyalgia (Section 1).
  • describe some of the interactions between the different axes (since the neuroendocrine system is best understood as a whole) (Annex)

But first, I will provide background on critical illness, the neuroendocrine axes and respective hormones.


Note: This Background section is long, but important to understanding the neuroendocrine dysfunctions that occur during critical illness and in ME/CFS and fibromyalgia.

Critical illness: two different phases

Critical illness refers to the physiological response to severe injury or infection, such as sepsis, liver disease, HIV infection, head injury, pancreatitis, burns, cardiac surgery, etc. Independent of the underlying condition, critical illness is associated with an “excessive response” of pro-inflammatory cytokines (Marik, 2007) and is characterized by a uniform dysregulation of the neuroendocrine axes (Langouche et al., 2014). This dysregulation may be maintained even once the initial inflammatory surge has settled (Mesotten and van den Berghe, 2006).

Just like ME/CFS, critical illness is studied by looking at both the immune-inflammatory pathways (i.e. immune cells, cytokines, O&NS, etc.) and the alterations in neuroendocrine axes (i.e. the up- and down-regulation of hormone activity). The study of the interactions between the two (i.e. the immune-inflammatory pathways and neuroendocrine axes) is also increasingly a subject of critical illness research.

Critical Illness

Severe infection or physical trauma can result in suppressed neuroendocrine axes that inhibit recovery; similar patterns are found in ME/CFS and fibromyalgia patients
[Source: https://websigns4u.com]

Researchers make a distinction between the acute phase of critical illness – in the first hours or days following severe trauma or infection; and the chronic or prolonged phase – in the case of patients that survive the acute phase but don’t start recovering and continue to need intensive care (“neither dying nor recovering,” Wikipedia). The prolonged phase is characterized by profound muscular weakness and changes in metabolism (Nelson et al., 2010, Loss et al., 2017).

The two phases notably present “two distinct neuroendocrine paradigms” (Van den Berghe, 1998). Indeed, while the acute phase is characterized by increased release of pituitary hormones; the prolonged phase is characterized by a suppression of the release of pituitary hormones. Simultaneously, hormone circulation and hormone up-take by the peripheral tissues differ markedly between these two phases as well (Mesotten and van den Berghe, 2006). More details follow in Section 1.[1]

The acute phase is considered to be a beneficial or “adaptive” response to the severe stress of injury or infection (shifting energy and resources to essential organs and repair). However, the physiological mechanisms in the prolonged phase are now generally considered to be harmful or “maladaptive,” hindering recovery.[2]

Neuroendocrine axes: regulated by central and peripheral mechanisms

The neuroendocrine axes mentioned above are a series of glands that signal to each other to produce hormones. The main axes are the thyrotropic, somatotropic, adreno-cortical, gonadotropic and lactotropic axes, which respectively regulate thyroid hormone, growth hormone, adrenal hormones, gonadal hormones and prolactin (see Table 1).

For each of the axes, the hypothalamus (in the middle of the brain) sends signals to the pituitary (also in the brain). The pituitary, in turn, sends specific signals towards the various “peripheral” glands, including the thyroid (at the neck), the liver (behind the rib cage), the adrenals (above the kidneys), and the gonads (ovaries and testes). These peripheral glands then secrete a range of hormones that affect the genomic and metabolic activities of cells throughout the body[3].

Significantly, under normal conditions, negative feedback loops – acting just like a thermostat in a house – act on the hypothalamus and pituitary (i.e. the “central level”) to suppress further production of hormones and thereby maintain homeostasis. Thus, when plasma concentrations of the peripheral hormones reach a certain “set-level,” the neuroendocrine axes slow down production (see Figure 1).

Figure 1:  The general cascade for production of peripheral hormones, and negative feedback loops

Peripheral Hormone Cascade

However, a number of “central” mechanisms can in fact alter the responsiveness of the hypothalamus and pituitary. These include the number and affinity (i.e. binding strength) of receptors for specific hormones in the two central glands. The more receptors, the more the hypothalamus and pituitary respond to signals. For example, if the number of hypothalamus receptors for cortisol increases, then it will slow down production at lower plasma cortisol concentrations (i.e. the hypothalamus has the impression that blood cortisol levels are elevated just because it has more cortisol receptors).

Additionally, mechanisms further “down-stream” (i.e. “peripheral” mechanisms) can also influence the level of hormone activity and (via the negative feedback loop) the overall function of the axes. They include:

  • changes in the abundance and affinity of carrier molecules that bind specific hormones in the plasma making them more or less “available” to cells (c.f. “bioavalability” of hormones).
  • increases/decreases in the energy-dependent transport of hormones into cells (and out of cells).
  • relative up/down regulation of enzymes that convert hormones into active or inactive forms (specifically for thyroid hormones).
  • variations in the form and quantity of hormone receptors at the level of the cells, thereby influencing the apparent “resistance” of cells to hormones.
  • alterations in the rate of break-down of the hormones (and thus also their “half-life”).
  • and others, not covered here.

Through experiments and observations, researchers are uncovering the complex combination of central and peripheral mechanisms that regulate neuroendocrine axes. Specifically, much research has gone into understanding how some physiological functions are put on hold (e.g. thinking and digestion) and others prioritized (e.g. combating infection or injury) during stress and critical illness (See Section 1). Crucially, researchers are finding that variations in these mechanisms are in part determined by the signals of the more than 100 different cytokines (van den Berghe, 2000).

One final relevant point regarding the function of endocrine axes: a lot of early research (and arguably clinical practice) in critical illness has been stumped by the failure to take into account the importance of the “pulsatility” of the signals from the pituitary to the peripheral glands (e.g. adrenals, gonads and liver). Indeed, the frequency and amplitude of the peaks and valleys in these signals (notably ACTH, LH and GH described in Section 1) may be as important as the overall volume of these signals in determining the production and activity of hormones (van den Berhge, 2000). However, pulsatility, of course, cannot be captured through just one blood test. Blood tests taken as frequently as every 20 minutes enabled researchers to capture signals’ peaks and valleys in order to demonstrate the endocrine dysfunction during prolonged critical illness (van den Berghe, 2016).

Hormones: a balance between catabolic and anabolic activities

The hormones produced by the neuroendocrine axes described above impact the activity of every cell. They determine our metabolism, growth, development, stress response, mood, strength, immune response, etc. Dysfunction in the respective axes producing these hormones leads to a myriad of symptoms present in prolonged critical illness, and possibly ME/CFS and fibromyalgia (see Table 1).

Researchers differentiate between anabolic hormones and catabolic hormones. Anabolic hormones (e.g. IGF-1 and testosterone) promote the building of molecules and tissue. The catabolic (e.g. cortisol and adrenaline) stimulate the break-down of molecules and tissues.

Researchers argue that catabolic activity may be beneficial during critical illness as amino acids, derived from the breakdown of peripheral tissues such as skeletal muscle and bone, are freed up for use by the central organs (Mesotten and van den Berghe, 2006). However, too many catabolic hormones relative to anabolic hormones in prolonged critical illness can lead to protein break-down in skeletal muscle, liver, kidney and heart, reducing their cell mass and leading to impaired function (Weekers and van den Berghe, 2004).

Similarly, the metabolic profiles of ME/CFS patients also exhibit a lack of anabolic activity (e.g. low NADPH) (Naviaux et al., 2016).

In sum: in just the last few decades, researchers have found that the neuroendocrine axes behave very differently in the acute vs the prolonged phases of critical illness, and that a multitude of central and peripheral mechanisms are involved. The result is a disbalance in the catabolic vs anabolic hormones, resulting in a myriad of symptoms during prolonged critical illness.

Table 1: Endocrine axes and function of the main hormones in adults

Name of Axis “Peripheral” endocrine glands Main hormones Function Symptoms of suppressed hormone activity
Thyrotropic axis: “HPT Axis”


Thyroid gland Thyroid hormones: T4, T3, T2, T1 and reverse T3 (RT3) Regulate baseline level of metabolism


“Hypothyroid-like” symptoms: tiredness, stiffness, constipation, dry skin, etc. Weight gain.
Somatotropic axis: “HPS Axis” Liver (mostly) Growth hormone (GH) (produced by the pituitary) and IGF-1 (by the liver). Regulation of insulin sensitivity, protein building (anabolic activity) and gut mucosal function Low energy and weak muscle strength. Poor recovery after physical activity. Exhaustion. Anxiety.
Adreno-cortical axis: “HPA Axis” Adrenal glands Glucocorticoids, notably cortisol Stress response via changes in glucose metabolism. Regulation of immune system Inability to deal with stress. Proneness to exaggerated immune responses. Weight loss.
Mineralocorticoids, notably aldosterone Regulate salt, water, electrolyte balance (blood pressure) Low blood pressure. Dizzy on standing up.
Androgens, notably DHEA (can also be derived from HPG axis). Function as steroids on muscle mass, fat storage, brain function, etc. Muscle fatigue. Thinning & dry hair.  Noise intolerance.
Gonadotropic axis: “HPG Axis” Gonads (ovaries & testes) Testosterone, estradiol, and progesterone Sexual functions, moods, response to stress, muscle mass Low testosterone: Weak muscle tone &


Lactotropic axis:

“HPP Axis”

Prolactin (produced by the pituitary) Role in metabolism and immune system (and milk production in women)

Sources: Hertoghe, 2002; Gupta and Silman, 2004; Mesotten and van den Berghe, 2006; Elijah et al., 2011;

Section 1: Neuroendocrine dysfunctions in critical illness and ME/CFS

In this section I will describe the dysfunctions found in four of the major neuroendocrine axes during critical illness, and highlight the similarities to dysfunctions in ME/CFS and fibromyalgia.  I will also summarize some of the “central” and “peripheral” mechanisms involved in these dysfunctions.

A.     Thyrotropic axis: “HPT Axis”

The HPT axis regulates the basal rate of our metabolism according to a daily rhythm. I described the normal function and dysfunction the HPT axis during critical illness in a previous blog post, but I will summarize the information below.

Normal conditions

In normal conditions, a feedback loop works to maintain stable plasma thyroid hormone concentrations according to a daily rhythm (Fisher, 1996). In brief, when unbound thyroid hormone concentrations in the plasma dip below a certain threshold, the hypothalamus produces thyrotropin-releasing hormones (TRH) in order to signal the pituitary to produce thyroid stimulating hormone (TSH), which in turn signals the thyroid gland to produce more thyroid hormones (TH) (see Figure 2). Again, this resembles the function of a thermostat in a house.

Figure 2: The cascade for production of thyroid hormone (TH)

Once thyroid hormones are released by the thyroid gland into the plasma, further steps need to occur before they can impact the metabolism of the target tissue: they are carried around the plasma by thyroid binders, they are transported in and out of cells by cellular transporters, they are converted into the active or inactive forms by enzymes, and then are ultimately received by nuclear receptors in target cells initiating gene transcription[4].

HPT dysfunctions in critical illness: non-thyroidal illness syndrome

However, in the case of severe trauma or infection, this neuroendocrine axis doesn’t work as expected. This dysregulation has a name: non-thyroidal illness syndrome (NTIS) – also called “euthyroid sick syndrome” or “low T3 syndrome.”[5]

In brief, during critical illness the activities of enzymes responsible for the conversion of thyroid hormones into active and inactivated forms are altered: at the level of the liver (and other peripheral tissues) the enzymes are regulated to increase the conversion of thyroid hormones into their inactivated form (RT3); however at the level of the hypothalamus the enzymes are regulated to convert thyroid hormones into its active form (T3).

This results in a generalized higher ratio of inactivated thyroid hormone (RT3) to active thyroid hormone (T3) observable in blood tests; but a higher concentration of T3 at the level of the hypothalamus. As a result, the hypothalamus doesn’t signal the pituitary (and in turn the thyroid) to produce more thyroid hormones (i.e the axis is suppressed). Using the metaphor from above, it is as if the air around the thermostat was being heated, inducing the shutdown of the central heating.

These “central” and “peripheral” mechanisms translate into a general and tissue-specific down-regulation of metabolism. Researchers have found that these mechanisms are induced and mediated by cytokines and O&NS (see my previous blog post for details and references).

While NTIS was initially considered to be beneficial in critical illness – i.e. a state of “protective” down-regulation of metabolism during times of duress (Carter et al. 1974) – it is increasingly seen as “maladaptive” and hampering the recovery of patients in the case of prolonged critical illness (De Groot, 1999; Plikat et al., 2007; Boelen et al., 2011; Wajner et al., 2012; van den Berghe, 2016; Mancini et al., 2016; Chatzitomaris et al., 2017).

HPT dysfunctions in ME/CFS and fibromyalgia: low thyroid hormone activity

Since at least 1997 researchers have demonstrated that low thyroid hormone activity is also an underlying mechanism in ME/CFS and fibromyalgia (Lowe 1997; Lowe et al., 1998; Lowe, 2000; Lowe and Yellin, 2008). Last year, researchers found that CFS patients had a significantly higher ratio of RT3 to T3 hormones than controls (Ruiz-Núñez’s et al., 2018) which would also imply low thyroid hormone activity. They write: “low circulating T3 and the apparent shift from T3 to RT3 may reflect more severely depressed tissue T3 levels.” In other words, the neuroendocrine dysfunction of the HPT axis in ME/CFS patients resembles that of patients in critical care units[6].

In sum: the action of the thyroid hormone is depressed during prolonged critical illness. Similar patterns have been found in ME/CFS and fibromyalgia. Low thyroid hormone activity can result in a large variety of symptoms including fatigue. The concept of “non-thyroidal illness syndrome” recognized and studied in the field of critical medicine can likely inform the field of ME/CFS and fibromyalgia.

B.      Somatotropic (growth hormone) axis: “HPS Axis”

The HPS axis plays important roles in growth and development of children, but also contributes to a variety of physiological pathways in adults, including balancing catabolic and anabolic activities (Mesotten and van den Berghe, 2006). HPS axis dysfunction is known to cause loss of muscle and bone mass, induce weakness (van den Berghe, 2016) and impact gut mucosa integrity as well as glucose and fat metabolism.

Normal conditions

Uniquely, in the case of the HPS axis, the hypothalamus sends both stimulating (+) and inhibiting (-) signals to the pituitary for the production of growth hormone (GH): these are, respectively, the GH-releasing hormone (GHRH) and the GH-inhibiting hormone (GHIH, also called somatostatin) (Mesotten and van den Berghe, 2006). In addition, ghrelin[7], mostly produced by the gut, also stimulates GH production by the pituitary (see Figure 3).

In normal conditions, GH is released by the pituitary in a pulsatile fashion under the control of these three signals, with peaks of GH levels alternating with virtually undetectable valleys in 3 to 5-hour intervals over the course of the day (van den Berghe, 2016). GH in turn has direct effects on some tissues and also stimulates the production of insulin-like growth hormone-1 (IGF-1) mostly by the liver. Nearly all of the IGF-1 hormones in the plasma are bound to IGF-binding proteins (IGFBP). IGF-1 and GH exert “negative feedback” on the hypothalamus and the pituitary to maintain homeostasis.

Figure 3: The cascade for the production of growth hormone (GH) and IGF-1

Interestingly, the half-life of GH is only 10 to 20 minutes, whereas the half-life of IGF-1 is more than 12 hours. Thus IGF-1 plasma concentrations are often used as proxies for GH secretion in clinical settings. However, GH and IGF-1 have different functions, particularly in the balance of anabolic vs. catabolic activities in the body. The use of IGF-1 as a proxy for GH ignores the impacts of the pulsatile secretion of GH on this balance.

HPS dysfunctions in critical illness: loss of pulsatile function

In the acute phase of critical illness, the pituitary produces more GH: higher peaks, lower valleys and increased pulse frequencies. This is, in fact, the result of the quick onset of two main peripheral mechanisms.

Firstly, under the influence of cytokines, the liver expresses fewer GH receptors (i.e. becomes “resistant” to GH) and thus produces less IGF-1 (van den Berghe, 2003). Secondly, alterations in IGF binding proteins results in IGF-1 being cleared out faster from the system (i.e. IGF-1 has a shorter “half-life”).

The lower IGF-1 concentrations resulting from these two peripheral mechanisms will – via the feedback loop inherent to the axis – spur more GH production (van den Berghe, 2016). Interestingly, recovery from critical illness is preceded by a normalization in IGF-1 and IGFBP levels (Mesotten and van den Berghe, 2006).

However, if a patient fails to recover within a few days, then GH secretion is no longer elevated (it may be low or normal), but the secretion becomes erratic and almost non-pulsatile (i.e. “loss of pulsatile function”). Experiments have demonstrated that this is largely due to a lack of stimulation by the hormone ghrelin – which you will recall is mostly produced by the gut (Mesotten and van den Berghe, 2006).[8]

As for the peripheral hormone, IGF-1, its levels are low or normal in prolonged critical illness. The “resistance” of the liver to GH (which had suppressed IGF-1 production during the acute phase of critical illness) does not persist during prolonged critical illness (van den Berghe, 2003; van den Berghe, 2016). However, without a concomitant pulsatile release of GH, the anabolic function of IGF-1 becomes inhibited (Mesotten and van den Berghe, 2006).

Again, although the increase in catabolic activity during the acute phase of critical illness may initially be beneficial because it serves to mobilize amino acids, the perpetuation of the imbalance in catabolic vs. anabolic activity (due in part to the loss of the pulsatile function of GH) is considered maladaptive. Thus, the dysfunction in the HPS axis contributes to muscle and bone wasting typically present in prolonged critical illness (Baxter 2001; van den Berghe et al., 1999).

HPS dysfunctions in ME/CFS and fibromyalgia: low GH levels and failed response to exercise

Dysfunctions in growth hormone regulation in ME/CFS and fibromyalgia have also been documented since at least the early 1990s. Indeed, a series of studies described GH to be relatively deficient in ME/CFS and fibromyalgia (Bennett et al., 1992; Bennett et al., 1997; and Allain et al., 1997; Berwaerts et al., 1998; Moorkens et al., 2000; Riedel et al., 2002; Paiva et al., 2002; Gupta and Silman, 2004; Cuatrecasas et al., 2010; Rigamonit et al., 2017).

Few if any studies appear to have assessed changes in the pulsatile function of growth hormone secretion in ME/CFS or fibromyalgia patients – probably due to the fact that this requires blood samples at frequent intervals day and night. However, studies have shown that fibromyalgia patients “failed to exhibit a GH response to exercise” (Paiva et al. 2002). In normal conditions, GH increases after exercise.

Similar to prolonged critical illness, IGF-1 levels are also documented to be generally low or low-normal in fibromyalgia patients (Bennet et al., 1992; Bennet et al., 1997; Bennet et al., 1998).

In sum: the pulsatile function of GH secretion is lost during prolonged critical illness. ME/CFS and fibromyalgia patients also exhibit alterations in GH secretion, including low GH and loss of response to exercise. Low or non-pulsatile GH secretion result in loss of muscle and bone mass, muscle weakness, and changes in glucose and fat metabolism.

C.      Adreno-cortical axis: “HPA Axis”

The HPA axis is the body’s primary stress management system. The HPA axis responds to physical and mental challenge in part by controlling the body’s cortisol levels (Gupta et al., 2007). Cortisol in turn modulates inflammation response, cardiovascular function and metabolism (Téblick et al., 2019).

Normal conditions

In normal conditions, the adrenal gland secretes cortisol during the day in pulses, with the highest levels in the early morning hours and lower levels at night. The hypothalamus signals to the pituitary with corticotrophin-releasing hormone (CRH), and to a lesser extent arginine vasopressin (AVP), to produce adrenocorticotropic hormone (ACTH). This is in turn signals the adrenals to release cortisol (and other hormones). Most of cortisol circulating in the blood is bound to carrier molecules (Tomas et al., 2013; van den Berghe, 2016) (see Figure 4).

As in the other axes, the HPA axis also has a negative feedback loop. Specifically, when free circulating cortisol attaches to glucocorticoid receptors (GRs) on the hypothalamus and pituitary, these glands slow down production of CRH and AVP, and ACTH respectively. The number and affinity of GRs is thus considered one of the most important determining factors in the regulation of the HPA axis (Tomas et al., 2013).

Figure 4: The cascade for the production of cortisol

HPA dysfunction in critical illness: lower than expected cortisol levels

High cortisol concentration in acute illness and severe trauma is a vital response that allows for fluid retention, increased cardiac output and blood pressure, and induces an appropriate immune response while protecting against excessive inflammation (Boonen et al., 2015; van den Berghe, 2016).

This response was initially thought to be a result of the adrenals being fired up to produce more cortisol via the “central control” of the hypothalamus and the pituitary. Recently, however, it has become clear that the increased cortisol availability during acute critical illness is largely driven by two “peripheral” mechanisms: a decrease in the abundance and affinity of the cortisol binding proteins in circulation, and a slowing of cortisol breakdown in the liver and kidney. Together these peripheral mechanisms result in higher cortisol levels (Peeters et al., 2014; Boonen et al., 2015; van den Berghe, 2016; Peeters et al. 2018a; Teblick et al., 2019). In other words, the adrenals produce basically normal amounts of cortisol during acute stress, but peripheral mechanisms increase the action of the hormone by augmenting its “bioavailability” and lengthening its “half-life.”

The higher cortisol concentrations resulting from these “peripheral mechanisms,” however, suppress CRH, AVP and ACTH release via the negative feedback loop on the hypothalamus and pituitary. Without stimulation by ACTH, the adrenals produce less cortisol, and levels eventually drop.[9]

In cases of prolonged critical illness, ACTH levels (surprisingly) continue to be depressed despite a normalization in cortisol levels within 28 days of illness (Peeters et al., 2017; Peeters et al., 2018b). Why and how this central suppression of ACTH is maintained is not clear and continues to be debated. Pro-inflammatory cytokines and O&NS likely play a leading role (Marik et al., 2007; Boonen et al., 2015).

Indeed, there are several mechanisms by which inflammatory cytokines have been shown to impact all levels of the HPA axis. The cytokine IL-1β is known to modulate CRH release by the hypothalamus; TNF-a is known to impair ACTH release by the pituitary; and TNF-a is also known to impair cortisol production by the adrenal glands (Marik et al., 2007).

Crucially, cytokines can mediate tissue-specific changes in the abundance and affinity of glucocorticoid receptor (GR) – which, again, is a major factor determining the activity of the HPA axis (Marik et al., 2007; Boonen et al., 2015). It is as if the tables turn, and cytokines now have the “upper hand” over the regulation of cortisol (whereas usually we consider cortisol levels to be mediating the inflammatory pathways).

This shift may be partially explained by the fact that our adrenal glands atrophy if they don’t experience pulsatile ACTH stimulation for more than 1 week. (Recall that during the acute phase, ACTH release is suppressed due to a spike in cortisol resulting from the quick onset of peripheral mechanisms).

Indeed, clinicians have observed adrenal atrophy and loss of integrity (e.g. zonational structure) in the post-mortem dissection of patients that had been critically ill for a few weeks, but not in the patients that quickly died from their illness or trauma (Boonen et al., 2015; Peeters et al. 2018a; Peeters et al., 2018b; Teblick et al., 2019). If the adrenals are thus weakened, it may be difficult for the HPA axis to regain the “upper hand” over the immune system during prolonged critical illness.

HPA dysfunction in ME/CFS and fibromyalgia: depressed cortisol levels

Dysfunction of the HPA axis has also been documented extensively in ME/CFS patients at least since the early 1990s (Demitrack et al., 1991; Scott et al., 1998; De Beeker et al., 1999; Gaab et al., 2002; Crofford et al., 2004; Jerjes et al., 2005; Segal et al., 2005; Van Den Eede et al., 2007; Van Den Eede et al., 2008).

Researchers have observed decreased baseline cortisol levels, blunted HPA axis responses to physical and psychological stressors, reduced HPA-axis responsivity to provocation tests (such as CRH and ACTH administration), and a heightened negative feedback loop (consistent with a higher abundance and affinity of glucocorticoid receptors at the level of the pituitary and hypothalamus).

Moreover, the morning peak of ACTH which stimulates the adrenal glands, is often missing or weak in ME/CFS patients, and the lack of pulsatile stimulus by ACTH also leads to adrenal atrophy in these patients (Scott et al., 1999). In other words, the HPA dysfunction in ME/CFS is not unlike the dysfunction in prolonged critical illness.

Strikingly, the magnitude of HPA axis dysfunction becomes more pronounced with illness duration and is associated with symptom severity (see review in Tomas et al., 2013). Additionally, peripheral mechanisms that depress the HPA axis such as increased levels of cortisol binding globulin, CBG (which decreases cortisol availability to the tissues) have been observed in CFS patients.

Similarly, HPA axis dysfunction is also present in the majority of fibromyalgia patients (Kirnap et al., 2001; Riedel et al., 2002; see review in Holtorf, 2008). Various mechanisms have been suggested, including depressed secretion of CRH by the hypothalamus, a deficiency of CRH receptors on the pituitary, and adrenal atrophy due to chronic under-stimulation by reduced ACTH levels (Gupta and Silman, 2004).

Undoubtedly the HPA-axis is suppressed in ME/CFS and fibromyalgia, and this is associated with pro-inflammatory cytokines and O&NS (De Beeker et al. 1999; Jason et al., 2009; Tomas et al., 2013; Morris et al., 2014; Morris et al., 2016). However the “bidirectional relationship” between the HPA-axis and inflammation (i.e. cortisol regulates the immune system; and inflammation can impact the HPA-axis) has lead researchers to struggle with the question of causality.

Specifically, researchers have pondered whether the down-regulation of the HPA-axis “permits” the excessive inflammatory pathways or whether causality runs the other way: i.e. if the inflammatory pathways are suppressing the HPA-axis (Tomas et al., 2013).

The conclusion of a recent paper that immune-inflammatory and O&NS pathways induce HPA axis dysfunction in ME/CFS (Morris et al., 2016) is also consistent with the observation that the inflammatory pathways induce endocrine dysfunctions in critical illness (independent of the nature of the original severe injury or infection).

In sum: the HPA-axis is suppressed in prolonged critical illness, as well as in ME/CFS and fibromyalgia. Low cortisol levels result in an inability to deal with stressors and a proneness to exaggerated inflammatory responses. 

An Aside: the HPA axis “bi-stability” model

ME/CFS researchers have developed a fascinating model to explain the persistence of a suppressed HPA-axis (Gupta et al., 2007; Ben-Zvi et al., 2009). The model suggests two “stable steady states” of cortisol production: a high and low state.  Researchers call this the “bi-stability of the HPA axis.” In other words, the body (through a network of feed-back mechanisms and other physiological mechanisms) will always tend towards one of these two steady states.

The model is based on the fact that stress (via cortisol) influences the number of glucocorticoid receptors (GRs) on the hypothalamus and pituitary. Recall that GRs play an essential part in the negative feedback loop: when cortisol from the plasma binds to them, they inhibit the production of CRH by the hypothalamus and ACTH by the pituitary (like a thermostat sensing that the house is warm enough). Thus, the higher the number of GRs, the less CRH and ACTH secretion; this ultimately leads to reduced cortisol production by the adrenals further down the axis[10].

The researchers argue that a short stress (i.e. a burst of cortisol) will produce a small perturbation in the concentration of GRs on the central glands which quickly returns to normal levels. However, long, repeated stress – from which the system doesn’t have time to recover – leads to a persistent state of high levels of GRs, forcing the HPA axis to an alternate ‘‘low cortisol” steady state. In model-speak: “the HPA axis reached the basin of attraction of the second stable steady state and remained there even after the removal of stress” (Gupta et al. 2007).

More recent models of the HPA axis have also included “non-genomic” feedback-controls (Zarzer et al. 2013), the endogenous effects of circadian rhythm (Hosseinichimeh et al., 2015), and interactions with the HPG axis and the immune system (Craddock et al., 2015; Morris et al., 2019) to explain how patients can get stuck in a “low-cortisol” steady state (i.e. how HPA-axis suppression is maintained even after the initial stress is gone).

D.     Gonadotropic axis: “HPG Axis”

The HPG axis not only regulates the reproductive system, but also impacts our immune system, muscle development and metabolism.

Normal conditions

Similar to other neuroendocrine axes, the production of gonadal hormones (i.e. estrogen, progesterone and testosterone) is regulated by the hypothalamus via the gonadal releasing hormones (GnRH) which stimulates the release of luteinizing hormone (LH) and follicle-stimulating hormone (FSH) by the pituitary.

These signals in turn stimulate the gonads (i.e. ovaries in women and testes in men) to produce estrogen, progesterone and testosterone. The system is kept in check via negative feedback loops on the pituitary and hypothalamus (see Figure 5).

Figure 5: The cascade for the production of gonadal hormones

HPG dysfunctions in critical illness: illness severity is correlated with axis suppression

The HPG axis response to critical illness has been studied much less than the other axes. However, existing studies show suppression of the HPG axis occur in both acute and prolonged critical illness states. Moreover, the more severe the illness, the greater the FSH suppression appears to be, implying that fewer signals are transmitted to the gonads to produce hormones (Raj et al., 2016; Vaikkakara et al., 2017). Indeed, testosterone levels are extremely low during prolonged critical illness in men (van den Berghe et al. 2001).

Similar to the other axes, researchers also surmise that pro-inflammatory cytokines are the probable mediators of the HPG axis suppression, via their inhibitory impact on the pulse of GnRH release by the hypothalamus (van den Berghe et al. 2001; Raj et al., 2016)[11].

HPG dysfunctions in ME/CFS and fibromyalgia: higher scores of sexual dysfunctions

There are also far fewer studies on the HPG axis in ME/CFS and fibromyalgia patients than on the other axes.

Higher scores of sexual dysfunctions were observed in fibromyalgia patients (Alves et al., 2016); and earlier menopause in ME/CFS patients (Boneva et al., 2015). Lower estrogen levels were also observed in fibromyalgia patients than in controls (Gupta and Silman, 2004). Moreover, it was determined that the cells of the immune system of ME/CFS patients have significantly lower estrogen receptors (Gräns et al. 2006), possibly inhibiting the effect of estrogen in modulating the immune system in ME/CFS.

Studies have also shown that levels of progesterone and testosterone (in fact derivatives of adrenal hormones in women) relate to pain sensitivity in fibromyalgia patients (Schertzinger, et al., 2018).

In sum: the HPG axis is suppressed during prolonged critical illness. Abnormalities related to gonadal hormones are also observed in ME/CFS and fibromyalgia. Muscle weakness and pain sensitivity can be a function of altered progesterone and testosterone levels.

E. Interactions across the neuroendocrine axes and interactions with the immune system

The neuroendocrine axes are often studied and described in isolation in both the literature on critical illness, and the literature on ME/CFS and fibromyalgia. This is problematic, however, because the various axes interact with each other – as well as with the immune system. (see Annex).

Whereas each of the neuroendocrine axis would tend to revert the body to a healthy homeostasis via feedback loops, the sum of the interactions across neuroendocrine axes — and interactions of neuroendocrine axes with the immune system — could create alternative and persistent “hypo-metabolic” steady states.

Certainly, if we had a comprehensive model of the various neuroendocrine axes – including how they interact with each other as well as with the inflammatory pathways – we might be able to better understand both critical illness and ME/CFS.[12] And we might also know what levers to use to move the whole system back to a normal state.

However, even based on current levels of knowledge, researchers on critical illness and ME/CFS have had some surprising successes with trial treatments that take into account the mechanisms within and interactions across neuroendocrine axes, as well as with the immune system (see Section 2).

Section 1 Summary:

Prolonged critical illness, ME/CFS and fibromyalgia are characterized by neuroendocrine dysfunctions (see Table 2). Research on critical illness has revealed that the suppression of the neuroendocrine axes mostly originates at the level of the hypothalamus during prolonged critical illness, and that inflammatory pathways play a role in inducing and maintaining this suppression.

These mechanisms may also explain the neuroendocrine dysfunctions found in ME/CFS and fibromyalgia. Such neuroendocrine dysfunctions have wide ranging implications, including on the balance between anabolic and catabolic processes, metabolism, and the regulation of the immune system.

Table 2: Summary of neuroendocrine dysfunctions and mechanisms in critical illness and ME/CFS


Critical illness & ME/CFS (+ FMS)


in prolonged critical illness

HPT Axis Low thyroid hormone function

-Lower T3

-(Lower T4)

-Higher RT3:T3


Hypothalamus: cytokine-induced alteration in set-point for release of TRH

Pituitary: cytokine-mediated suppression of TSH secretion

Thyroid gland: cytokine-mediated reduction in T4 secretion by the thyroid gland.

Periphery: Upregulation of T3 to RT3 conversion (notably in liver), etc.

HPS Axis


Low growth hormone function

-Loss of pulsatile release (in prolonged critical illness)

-Lower GH secretion (in ME/CFS and fibromyalgia)

-Low or normal IGF-1

Hypothalamus: lack of stimulation by gherlin; change in relative balance of hypothalamic stimulating / inhibiting hormones (GHRH / GHIH)

Pituitary: lack of stimulation by gherlin

Liver: reduction in GH receptors (resistance to GH), but apparently only during acute phase

HPA Axis Lower than expected cortisol function

-Lower cortisol baseline than expected

-Blunted HPA axis response to stressors

-Increased negative feedback

-Loss of morning ACTH peak

Hypothalamus: cytokine-mediated increase in glucorticoid receptors (which inhibit CRH release)

Pituitary: increase in glucorticoid receptors; decrease in CRH receptors (inhibit ACTH release)

Adrenal gland: adrenal atrophy (due to lack of pulsatile ACTH stimulation during acute phase)

HPG Axis Suppression of HPG axis (in critical illness)

(unclear for ME/CFS and fibromyalgia)

-Lower levels of testosterone

-Sexual dysfunctions

Hypothalamus: cytokine-induced suppression of pulse of GnRH release

The Low T3 Series on Health Rising

The Critical Illness Series On Health Rising


[1] Note: This “biphasic” pattern of the neuroendocrine system during critical illness was really only recognized in the early 1990s (Weekers and van den Berghe, 2004)!

[2] Note: Researchers surmise that because prolonged critical illness basically did not exist prior to the development of modern intensive care medicine (i.e. individuals would not have survived), the processes in this phase were not subject to evolutionary forces (Weekers and van den Berghe, 2004).

[3] Note: signals sent by the hypothalamus and pituitary are tropic hormones; peripheral glands produce non-tropic hormones (i.e. peripheral hormones).

[4] Note: thyroid hormones can also exert non-genomic effects

[5] Note: NTIS is not “hypothyroidism.” Indeed, the terms “non-thyroidal” and “euthyroid” indicate that that the dysfunction is not at the level of the thyroid gland and that the signal from the pituitary (i.e. TSH) is within the normal range.

[6] Note: A further neuroendocrine dysfunction implicating the immune system has also been repeatedly documented in fibromyalgia patients: higher rates of antithyroid antibodies – also called Hashimoto’s (Lowe and Yellin, 2008).

[7] Note: gherlin was only discovered in 1996 and first reported in 1999.

[8] There is also evidence for changes in the relative amounts of GHIH and GHRH signals from the hypothalamus (cite).

[9] Note: circulating bile acids also appear to play a role in CRH suppression

[10] Note: cortisol also inhibits the expression of CRH receptors on the pituitary; with less CRH receptors the signal from the hypothalamus to the pituitary is blunted.

[11] Note: estradiol concentrations are increased in both men and women during critical illness, but those are likely products of the conversion of androgen hormones secreted by the adrenals, not products of the gonads (van den Berhge, 2000).

[12] Note: the most comprehensive model I found was by Morris et al., 2019

Annex: Some interactions between neuroendocrine axes and interactions of neuroendocrine axes with the immune system.

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